| Entry |
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| Symbol |
ARID2, BAF200, CSS6, SMARCF3, ZIPZAP, p200
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| Name |
(RefSeq) AT-rich interaction domain 2
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| KO |
| K11765 | AT-rich interactive domain-containing protein 2 |
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| Organism |
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| Pathway |
| hsa03082 | ATP-dependent chromatin remodeling |
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| Disease |
| H00048 | Hepatocellular carcinoma |
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| Brite |
KEGG Orthology (KO) [BR:hsa00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
196528 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
196528 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:hsa03000]
196528 (ARID2)
03021 Transcription machinery [BR:hsa03021]
196528 (ARID2)
03036 Chromosome and associated proteins [BR:hsa03036]
196528 (ARID2)
Transcription factors [BR:hsa03000]
Eukaryotic type
Helix-turn-helix
ARID
196528 (ARID2)
Transcription machinery [BR:hsa03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
196528 (ARID2)
Chromosome and associated proteins [BR:hsa03036]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
196528 (ARID2)
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| SSDB |
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| Motif |
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| Other DBs |
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| Structure |
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| LinkDB |
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| Position |
12:45729706..45908037
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| AA seq |
1835 aa
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ |
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| NT seq |
5508 nt +upstreamnt +downstreamnt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcggat
tatctgcgtcaaagttatgggctgtccatggactttaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaacgtatgc
actctcctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagatcctaaaatcatc
actttactacttgctaatgccggggtgtttgacgacactttaggatccttttccactgta
tttggagaagaatggaaagagaagactgatagagacttcgttaagttttggaaagacatc
gttgatgataatgaagttcgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggagtctttatttcatccacctcgaaagctgggcattaacgat
attgaaggacagcgggtacttcagattgcagtgattttgagaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctttaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttactggaccctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgtctaatgtcaagggatagatttttaaagatgagaggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttaatttgtgaatatgtggatcaggattcctac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatacatgctcacggaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggccctgat
gcactagctgcggtaaaactcattgaacacccaagttccagtcatcaaatgttatctgaa
attaggccacaagctatagagcaagtccaaacccagactcatgtagcatctgccccagct
tccagagcagttgtagcgcagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtt
tctcgagcagaaatgtattctgaatacctctcgacttgcagtaaattagctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagtagcaatgggcaggcacatattcatgtggtaggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctacttct
gttgttcgtgttgattctgttcctgatgtatctcctgctccttcacctgcaggaatccct
catggatcacaaaccataggaaaccattttcagaggactcctgttgccaaccaatcttca
aatctgactgcaacacaaatgtcttttcctgtacaaggtgttcatactgtggcacaaact
gtttcaagaattccacaaaatccttcacctcatacccaccagcaacaaaatgctccagtg
actgtcattcaaagtaaagctccaattccttgtgaagttgttaaggctacagttatccag
aattccataccccagacaggagttcctgttagtattgctgttggaggaggacctccacag
agttctgttgttcagaatcatagtacagggccacaacctgttacagttgtgaattctcag
acattgcttcaccatccatctgtaattccacagcagtctccattacacacagtggtacca
ggacagatcccttcaggcactcctgttacagtaattcaacaagctgtcccacagagtcat
atgtttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccaacctgtgcaaacttcatctcaacagacatcagctggtagc
cagtcacaagatactgttatcatagcacccccacagtatgtaacaacttctgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttactatt
gctggtgtcccaagtccacaagcctcaagggtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatctacagtggtacagcagcctattcaacaaccacagcag
ccaacccaacaaagcgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactggacaacctaacataactccatcttcttcaccatcacctgtcccagctact
aataaccaagtccctactgccatgtcgtcgtcctctacccctcaatcacagggaccacct
cctactgtcagtcaaatgttatctgtgaaaaggcagcaacagcagcaacattcaccagca
cccccaccacagcaggtacaagtacaagttcagcagccccaacaagtacagatgcaagtt
caacctcaacagtcgaatgcaggagttggtcagcctgcctctggtgagtcgagtctgatt
aaacagcttctgcttccgaaacgtggtccttcaacaccaggtggtaagcttattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtctatcag
gtggccagtaaccaagccgcaggttttggagtgcaggggcaaactccagctcagcagcta
ttggttgggcagcaaaatgttcagttggtcccaagtgcaatgccaccctcagggggagta
caaactgtgcccatttcgaacttacaaatattgccaggtccactgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacg
agttttgcacctgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagcggaacgcagacaggagttggacttccagtacaaacgcttccagccact
caagcatctcctgctggacaatcatcatgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaggaggaagcaaaggaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggagccacaaacaccagcaat
ggggatacaaaggaaaatgaaatgcatgtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgagactaatcagtgctca
ctaatcagtaatgggccatcattggaattaggtgagaatggagcatctgggaaacagaac
tcagaacaaatagacatgcaagatatcaaaagtgatttgagaaaaccgctagttaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcataaa
acttccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttagat
atcactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgta
ttaactttgggtggttcatctgtgagcagtatacaggaggcttcaaatgcggcaacacag
caatttagtggtactgatttgcttaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacaggga
catcaaatcatagcagttcccgactcaggatcaaaagtatcccattctcctgccctatca
tctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccagcagag
gatactgatagggaaacagtcgcaggaattccaaataaagtaggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagcgcaacaatggttgctgtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcaacagcat
ccaccaacatatgtacagaatgtggtcccgcagaacactcctatgccaccttcaccagct
gtacaagtgcagggccagcctaacagttctcagccttctccattcagtggatccagtcag
cctggagatccaatgagaaaacctggacagaacttcatgtgtctgtggcagtcttgtaaa
aagtggtttcagacaccctcacaggttttctaccatgcagcaactgaacatggaggaaaa
gatgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagcggttt
tcttttattacccacttgcaggataagcactgttcaaaggatgccctacttgcaggatta
aaacaagatgaaccaggacaagcaggaagtcagaagtcttctaccaagcagccaactgta
gggggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgctgca
cttatggctctgaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaataacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaggaacaagaaaaagactcagaaatgctgcagtga |
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