Download MendeleyStructure of lymphostatin, a potent virulence factor from pathogenic Escherichia coli
Griessmann, M., Rasmussen, T., Flegler, V., Kraft, C., Schneider, R., Spantzel, L., Borsch, M., Bottcher, B.To be published.
9EUW | pdb_00009euw
Lymphostatin, conformation 2 (composite structure)
- PDB DOI: https://doi.org/10.2210/pdb9EUW/pdb
- EM Map EMD-19988: EMDB EMDataResource
- Classification: TOXIN
- Organism(s): Escherichia coli O127:H6 str. E2348/69
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2024-03-28 Released: 2025-04-09
- Funding Organization(s): German Research Foundation (DFG)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.80 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Efa1/LifA protein | 3,229 | Escherichia coli O127:H6 str. E2348/69 | Mutation(s): 0 Gene Names: E2348C_3234 |  | |
UniProt | |||||
Find proteins for B7UI23 (Escherichia coli O127:H6 (strain E2348/69 / EPEC)) Explore B7UI23 Go to UniProtKB: B7UI23 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | B7UI23 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.80 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION | 5.0 |
| MODEL REFINEMENT | PHENIX | 1.20.1 |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-04-09 Deposition Author(s): Griessmann, M., Rasmussen, T., Bottcher, B.
| Funding Organization | Location | Grant Number |
|---|---|---|
| German Research Foundation (DFG) | Germany | 359471283 |
| German Research Foundation (DFG) | Germany | 456578072 |
| German Research Foundation (DFG) | Germany | 525040890 |
| German Research Foundation (DFG) | Germany | 428774170 |
| German Research Foundation (DFG) | Germany | INST 93/903-1 |
| German Research Foundation (DFG) | Germany | INST 93/1042-1 |
| German Research Foundation (DFG) | Germany | 93/1143-1 |
| German Research Foundation (DFG) | Germany | BO1150/18-1 |
Revision History (Full details and data files)
- Version 1.0: 2025-04-09
Type: Initial release
