Download MendeleyCryo-EM structure of the CHIKV nsP3 peptide in complex with the NTF2L domain of G3BP1
Liu, Y.Z., Wang, J., Wang, K.T., Lei, J.To be published.
9IVR | pdb_00009ivr
Cryo-EM structure of the CHIKV nsP3 peptide in complex with the NTF2L domain of G3BP1 (Conformation II)
- PDB DOI: https://doi.org/10.2210/pdb9IVR/pdb
- EM Map EMD-60933: EMDB EMDataResource
- Classification: VIRAL PROTEIN
- Organism(s): Homo sapiens, Chikungunya virus
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2024-07-24 Released: 2025-04-09
- Funding Organization(s): Ministry of Science and Technology (MoST, China)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.80 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ras GTPase-activating protein-binding protein 1 | 141 | Homo sapiens | Mutation(s): 0 Gene Names: G3BP1, G3BP EC: 3.6.4.12 (PDB Primary Data), 3.6.4.13 (PDB Primary Data) |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q13283 (Homo sapiens) Explore Q13283 Go to UniProtKB: Q13283 | |||||
PHAROS: Q13283 GTEx: ENSG00000145907 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q13283 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Polyprotein P1234 | 54 | Chikungunya virus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for A0A0U5KFN5 (Chikungunya virus) Explore A0A0U5KFN5 Go to UniProtKB: A0A0U5KFN5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A0U5KFN5 | ||||
Sequence AnnotationsExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.80 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | cryoSPARC |
Entry History & Funding Information
Deposition Data
- Released Date: 2025-04-09 Deposition Author(s): Wang, J., Liu, Y.Z., Lei, J., Wang, K.T.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Science and Technology (MoST, China) | China | 2021YFF0702004 |
| Ministry of Science and Technology (MoST, China) | China | 2022YFC2303701 |
Revision History (Full details and data files)
- Version 1.0: 2025-04-09
Type: Initial release
